Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6806 family protein | AX767_RS18430 | Not Available | Positive | 3825828 - 3826478 | 23564.5 |
| hypothetical protein | AX767_RS18435 | Not Available | Negative | 3826480 - 3827250 | 28272.4 |
| glutamate racemase | AX767_RS18440 | Not Available | Negative | 3827262 - 3828083 | 28374.8 |
| fumarate hydratase | AX767_RS18445 | Not Available | Negative | 3828080 - 3829633 | 55305.9 |
| branched-chain amino acid abc transporter substrate-binding protein | AX767_RS18450 | Not Available | Negative | 3829704 - 3830960 | 45865.6 |
| hypothetical protein | AX767_RS21450 | Not Available | Positive | 3831205 - 3831381 | 6286.69 |
| class ii fumarate hydratase | AX767_RS18455 | Not Available | Positive | 3831443 - 3832828 | 49165.6 |
| yqha family protein | AX767_RS18460 | Not Available | Negative | 3832850 - 3833464 | 22444.1 |
| acetate--coa ligase | AX767_RS18465 | Not Available | Positive | 3833621 - 3835621 | 72746.2 |
| signal transduction histidine kinase | AX767_RS18470 | Not Available | Positive | 3835734 - 3836222 | 17957.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
