Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | AX767_RS18380 | Not Available | Positive | 3815047 - 3816153 | 38249.5 |
| efflux rnd transporter permease subunit | AX767_RS18385 | Not Available | Positive | 3816150 - 3819332 | 115455.0 |
| Trna-leu | Not Available | Not Available | Positive | 3819407 - 3819493 | Not Available |
| trigger factor | AX767_RS18395 | Not Available | Positive | 3819520 - 3820833 | 48748.9 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | AX767_RS18400 | Not Available | Positive | 3820926 - 3821534 | 22357.1 |
| atp-dependent clp protease atp-binding subunit clpx | AX767_RS18405 | Not Available | Positive | 3821635 - 3822903 | 46453.2 |
| endopeptidase la | AX767_RS18410 | Not Available | Positive | 3822913 - 3825360 | 89674.1 |
| Trna-gly | Not Available | Not Available | Positive | 3825412 - 3825487 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 3825543 - 3825616 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 3825713 - 3825805 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
