Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | AX767_RS18330 | Not Available | Positive | 3805407 - 3806474 | 38293.1 |
| alpha/beta fold hydrolase | AX767_RS18335 | Not Available | Positive | 3806471 - 3807346 | 31944.1 |
| duf1993 domain-containing protein | AX767_RS18340 | Not Available | Positive | 3807411 - 3807917 | 18637.4 |
| ferrochelatase | AX767_RS18345 | Not Available | Negative | 3807921 - 3808973 | 38891.7 |
| had family hydrolase | AX767_RS18350 | Not Available | Positive | 3808989 - 3809756 | 27924.3 |
| hypothetical protein | AX767_RS18355 | Not Available | Negative | 3809753 - 3810052 | 10923.5 |
| hydroxysqualene dehydroxylase hpne | AX767_RS18360 | Not Available | Negative | 3810049 - 3811299 | 43452.7 |
| presqualene diphosphate synthase hpnd | AX767_RS18365 | Not Available | Negative | 3811296 - 3812135 | 31634.2 |
| squalene synthase hpnc | AX767_RS18370 | Not Available | Negative | 3812149 - 3813078 | 33908.4 |
| potassium transporter kup | AX767_RS18375 | Not Available | Positive | 3813122 - 3814966 | 65959.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
