Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding s4 domain-containing protein | AX767_RS18230 | Not Available | Negative | 3783539 - 3783961 | 15506.4 |
| sensor histidine kinase | AX767_RS18235 | Not Available | Negative | 3783976 - 3785376 | 50538.3 |
| response regulator transcription factor | AX767_RS18240 | Not Available | Negative | 3785373 - 3786053 | 24935.4 |
| bug family tripartite tricarboxylate transporter substrate binding protein | AX767_RS18245 | Not Available | Positive | 3786165 - 3787130 | 33023.9 |
| tripartite tricarboxylate transporter tctb family protein | AX767_RS18250 | Not Available | Positive | 3787263 - 3787805 | 18980.3 |
| tripartite tricarboxylate transporter permease | AX767_RS18255 | Not Available | Positive | 3787819 - 3789339 | 52929.4 |
| hypothetical protein | AX767_RS18260 | Not Available | Negative | 3789346 - 3789696 | 11767.9 |
| hypothetical protein | AX767_RS18265 | Not Available | Negative | 3789779 - 3790513 | 26618.5 |
| efflux rnd transporter permease subunit | AX767_RS18270 | Not Available | Negative | 3790515 - 3793631 | 111312.0 |
| efflux rnd transporter periplasmic adaptor subunit | AX767_RS18275 | Not Available | Negative | 3793628 - 3794767 | 39394.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
