Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydroxymethyltransferase | AX767_RS18085 | Not Available | Negative | 3752871 - 3754115 | 44740.8 |
| lytic transglycosylase domain-containing protein | AX767_RS18090 | Not Available | Negative | 3754313 - 3755146 | 29671.9 |
| duf748 domain-containing protein | AX767_RS18095 | Not Available | Positive | 3755759 - 3759496 | 131978.0 |
| duf349 domain-containing protein | AX767_RS18100 | Not Available | Positive | 3759603 - 3762464 | 101137.0 |
| zinc-dependent peptidase | AX767_RS18105 | Not Available | Negative | 3762481 - 3763272 | 29322.8 |
| udp-2,3-diacylglucosamine diphosphatase | AX767_RS18110 | Not Available | Negative | 3763289 - 3764062 | 28669.8 |
| peptidylprolyl isomerase | AX767_RS18115 | Not Available | Negative | 3764059 - 3764571 | 18403.8 |
| peptidylprolyl isomerase | AX767_RS18120 | Not Available | Negative | 3764604 - 3765152 | 19510.4 |
| tetratricopeptide repeat protein | AX767_RS18125 | Not Available | Negative | 3765247 - 3765849 | 21551.9 |
| cysteine--trna ligase | AX767_RS18130 | Not Available | Positive | 3766059 - 3767435 | 50472.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
