Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | AX767_RS01720 | Not Available | Negative | 311155 - 311931 | 27230.6 |
| carboxymuconolactone decarboxylase family protein | AX767_RS01725 | Not Available | Negative | 311928 - 312377 | 16476.8 |
| 3-carboxy-cis,cis-muconate cycloisomerase | AX767_RS01730 | Not Available | Negative | 312374 - 313585 | 42410.9 |
| rhomboid family intramembrane serine protease | AX767_RS01735 | Not Available | Negative | 313609 - 314190 | 20854.1 |
| serine hydrolase domain-containing protein | AX767_RS01740 | Not Available | Negative | 314212 - 315326 | 39593.8 |
| cupin domain-containing protein | AX767_RS01745 | Not Available | Positive | 315407 - 315829 | 15708.7 |
| hybrid sensor histidine kinase/response regulator | AX767_RS01750 | Not Available | Negative | 315813 - 317678 | 66622.9 |
| gbsr/marr family transcriptional regulator | AX767_RS01755 | Not Available | Positive | 317762 - 318349 | 22567.3 |
| nadph-dependent f420 reductase | AX767_RS01760 | Not Available | Negative | 318391 - 318978 | 20026.3 |
| serine hydrolase domain-containing protein | AX767_RS01765 | Not Available | Negative | 319024 - 319631 | 21603.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
