Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | AX767_RS18030 | Not Available | Negative | 3742605 - 3743759 | 40829.0 |
| riboflavin synthase | AX767_RS18035 | Not Available | Negative | 3743756 - 3744415 | 22863.2 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | AX767_RS18040 | Not Available | Negative | 3744460 - 3745578 | 38902.7 |
| gsph/fimt family pseudopilin | AX767_RS18045 | Not Available | Positive | 3745736 - 3746266 | 18697.7 |
| type iv pilus modification protein pilv | AX767_RS18050 | Not Available | Positive | 3746274 - 3746801 | 18517.9 |
| pilw family protein | AX767_RS18055 | Not Available | Positive | 3746798 - 3747610 | 28637.1 |
| pilus assembly pilx family protein | AX767_RS21095 | Not Available | Positive | 3747611 - 3748558 | 33482.0 |
| pilc/pily family type iv pilus protein | AX767_RS18070 | Not Available | Positive | 3748630 - 3751932 | 115665.0 |
| type iv pilin protein | AX767_RS18075 | Not Available | Positive | 3751966 - 3752394 | 15216.1 |
| transcriptional regulator nrdr | AX767_RS18080 | Not Available | Negative | 3752408 - 3752851 | 17121.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
