Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter tctb family protein | AX767_RS17930 | Not Available | Positive | 3721433 - 3721861 | 15459.8 |
| tripartite tricarboxylate transporter permease | AX767_RS17935 | Not Available | Positive | 3721863 - 3723386 | 53662.2 |
| sensor histidine kinase | AX767_RS17940 | Not Available | Negative | 3723358 - 3724488 | 41015.4 |
| response regulator | AX767_RS17945 | Not Available | Negative | 3724469 - 3725155 | 24830.9 |
| hypothetical protein | AX767_RS17950 | Not Available | Positive | 3725214 - 3725543 | 11904.0 |
| tolc family protein | AX767_RS17955 | Not Available | Positive | 3725727 - 3726920 | 41691.0 |
| hypothetical protein | AX767_RS17960 | Not Available | Positive | 3726941 - 3727501 | 19129.8 |
| efflux rnd transporter periplasmic adaptor subunit | AX767_RS17965 | Not Available | Positive | 3727498 - 3728601 | 38070.9 |
| efflux rnd transporter permease subunit | AX767_RS17970 | Not Available | Positive | 3728928 - 3732047 | 111460.0 |
| hypothetical protein | AX767_RS17975 | Not Available | Positive | 3732082 - 3732462 | 13096.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
