Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismatase family cysteine hydrolase | AX767_RS01675 | Not Available | Negative | 300653 - 301222 | 20225.2 |
| gntr family transcriptional regulator | AX767_RS01680 | Not Available | Positive | 301420 - 302253 | 30523.1 |
| bug family tripartite tricarboxylate transporter substrate binding protein | AX767_RS01685 | Not Available | Positive | 302285 - 303268 | 34257.5 |
| 3-isopropylmalate dehydratase large subunit | AX767_RS01690 | Not Available | Positive | 303268 - 304533 | 43705.6 |
| 3-isopropylmalate dehydratase | AX767_RS01695 | Not Available | Positive | 304530 - 305063 | 18649.4 |
| isocitrate lyase/pep mutase family protein | AX767_RS01700 | Not Available | Positive | 305060 - 305914 | 30495.7 |
| crp/fnr family transcriptional regulator | AX767_RS01705 | Not Available | Positive | 305946 - 306674 | 26728.6 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | AX767_RS01710 | Not Available | Negative | 306731 - 309757 | 109525.0 |
| trap transporter substrate-binding protein | AX767_RS01715 | Not Available | Negative | 309754 - 310869 | 39757.4 |
| hypothetical protein | AX767_RS21225 | Not Available | Positive | 311009 - 311158 | 5331.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
