Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | AX767_RS17555 | Not Available | Negative | 3633861 - 3634505 | 22328.7 |
| penicillin acylase family protein | AX767_RS17560 | Not Available | Negative | 3634511 - 3636907 | 85070.1 |
| amidase | AX767_RS17565 | Not Available | Positive | 3637029 - 3638468 | 51561.0 |
| cdp-alcohol phosphatidyltransferase family protein | AX767_RS17570 | Not Available | Negative | 3638478 - 3639095 | 21993.9 |
| gtpase/duf3482 domain-containing protein | AX767_RS17575 | Not Available | Negative | 3639106 - 3640560 | 52264.4 |
| duf2868 domain-containing protein | AX767_RS17580 | Not Available | Negative | 3640557 - 3641933 | 49602.9 |
| abc transporter atp-binding protein | AX767_RS17585 | Not Available | Negative | 3642255 - 3644099 | 66929.8 |
| doda-type extradiol aromatic ring-opening family dioxygenase | AX767_RS17590 | Not Available | Positive | 3644231 - 3645040 | 29432.2 |
| fasciclin domain-containing protein | AX767_RS17595 | Not Available | Negative | 3645078 - 3645887 | 27808.8 |
| glycosyltransferase family 2 protein | AX767_RS17600 | Not Available | Negative | 3646299 - 3647801 | 54607.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
