Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconate 2-dehydrogenase subunit 3 family protein | AX767_RS17255 | Not Available | Positive | 3570674 - 3571405 | 26411.2 |
| gmc family oxidoreductase | AX767_RS17260 | Not Available | Positive | 3571416 - 3573188 | 64589.8 |
| c-type cytochrome | AX767_RS17265 | Not Available | Positive | 3573185 - 3574588 | 49175.6 |
| serine hydrolase domain-containing protein | AX767_RS17270 | Not Available | Negative | 3574601 - 3576047 | 52933.1 |
| ethanolamine ammonia-lyase subunit eutc | AX767_RS17275 | Not Available | Negative | 3576140 - 3576949 | 28597.1 |
| ethanolamine ammonia-lyase subunit eutb | AX767_RS17280 | Not Available | Negative | 3576946 - 3578340 | 49961.9 |
| ethanolamine permease | AX767_RS17285 | Not Available | Negative | 3578647 - 3580011 | 48568.2 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | AX767_RS17290 | Not Available | Positive | 3580194 - 3580550 | 12293.7 |
| dna oxidative demethylase alkb | AX767_RS17295 | Not Available | Positive | 3580582 - 3581223 | 22654.0 |
| luxr c-terminal-related transcriptional regulator | AX767_RS17300 | Not Available | Negative | 3581248 - 3581814 | 20942.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
