Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-3 | AX767_RS17205 | Not Available | Positive | 3562491 - 3563105 | 23031.3 |
| 50s ribosomal protein l35 | AX767_RS17210 | Not Available | Positive | 3563241 - 3563444 | 7516.55 |
| 50s ribosomal protein l20 | AX767_RS17215 | Not Available | Positive | 3563469 - 3563828 | 13406.7 |
| phenylalanine--trna ligase subunit alpha | AX767_RS17220 | Not Available | Positive | 3563937 - 3565013 | 39798.2 |
| phenylalanine--trna ligase subunit beta | AX767_RS17225 | Not Available | Positive | 3565047 - 3567473 | 87412.0 |
| integration host factor subunit alpha | AX767_RS17230 | Not Available | Positive | 3567479 - 3567841 | 13135.6 |
| merr family transcriptional regulator | AX767_RS17235 | Not Available | Positive | 3567906 - 3568370 | 18063.7 |
| Trna-pro | Not Available | Not Available | Positive | 3568397 - 3568473 | Not Available |
| acetyl-coa hydrolase/transferase family protein | AX767_RS17245 | Not Available | Positive | 3568641 - 3569939 | 46434.8 |
| peroxidase-related enzyme | AX767_RS17250 | Not Available | Negative | 3569964 - 3570542 | 21704.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
