Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AX767_RS17155 | Not Available | Negative | 3551440 - 3552219 | 28073.5 |
| abc transporter substrate-binding protein | AX767_RS17160 | Not Available | Negative | 3552254 - 3553264 | 36095.9 |
| abc transporter permease | AX767_RS17165 | Not Available | Negative | 3553302 - 3554075 | 28002.7 |
| tetr/acrr family transcriptional regulator | AX767_RS17170 | Not Available | Negative | 3554204 - 3554842 | 24181.1 |
| thiamine pyrophosphate-binding protein | AX767_RS17175 | Not Available | Positive | 3554948 - 3556663 | 60887.8 |
| swib/mdm2 domain-containing protein | AX767_RS17180 | Not Available | Negative | 3556725 - 3557147 | 14563.3 |
| dmt family transporter | AX767_RS17185 | Not Available | Negative | 3557281 - 3558168 | 31129.1 |
| gamma-glutamylcyclotransferase family protein | AX767_RS17190 | Not Available | Positive | 3558266 - 3558667 | 14352.1 |
| isocitrate lyase | AX767_RS17195 | Not Available | Positive | 3558895 - 3560226 | 48587.2 |
| threonine--trna ligase | AX767_RS17200 | Not Available | Positive | 3560485 - 3562392 | 72332.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
