Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan dd-metalloendopeptidase family protein | AX767_RS16855 | Not Available | Positive | 3493786 - 3494709 | 31451.6 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | AX767_RS16860 | Not Available | Positive | 3494745 - 3496184 | 52805.6 |
| bax inhibitor-1/ycca family protein | AX767_RS16865 | Not Available | Negative | 3496231 - 3496941 | 25020.3 |
| glcg/hbps family heme-binding protein | AX767_RS16870 | Not Available | Positive | 3497106 - 3497513 | 13647.5 |
| hemin uptake protein hemp | AX767_RS16875 | Not Available | Negative | 3497691 - 3497903 | 7218.68 |
| exbd/tolr family protein | AX767_RS16880 | Not Available | Negative | 3498007 - 3498420 | 15206.3 |
| mota/tolq/exbb proton channel family protein | AX767_RS16885 | Not Available | Negative | 3498426 - 3499142 | 25590.1 |
| energy transducer tonb | AX767_RS21985 | Not Available | Negative | 3499155 - 3499562 | 14015.8 |
| (2fe-2s)-binding protein | AX767_RS21070 | Not Available | Negative | 3499954 - 3500226 | 9675.55 |
| fe2+-dependent dioxygenase | AX767_RS16900 | Not Available | Negative | 3500339 - 3501019 | 25121.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
