Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | AX767_RS16805 | Not Available | Positive | 3485899 - 3486798 | 33035.5 |
| tartrate dehydrogenase | AX767_RS16810 | Not Available | Positive | 3486795 - 3487880 | 39396.3 |
| hu family dna-binding protein | AX767_RS16815 | Not Available | Positive | 3488108 - 3488380 | 9458.64 |
| Trna-val | Not Available | Not Available | Positive | 3488397 - 3488472 | Not Available |
| peptidylprolyl isomerase | AX767_RS16825 | Not Available | Positive | 3488554 - 3490479 | 69385.2 |
| Trna-his | Not Available | Not Available | Positive | 3490509 - 3490584 | Not Available |
| h-ns family nucleoid-associated regulatory protein | AX767_RS16835 | Not Available | Positive | 3490697 - 3491038 | 12238.5 |
| nadph:quinone oxidoreductase family protein | AX767_RS16840 | Not Available | Negative | 3491117 - 3492103 | 34461.9 |
| 5'/3'-nucleotidase sure | AX767_RS16845 | Not Available | Positive | 3492226 - 3492993 | 27140.4 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | AX767_RS16850 | Not Available | Positive | 3492998 - 3493774 | 27080.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
