Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | AX767_RS16655 | Not Available | Positive | 3453459 - 3454160 | 24596.9 |
| hybrid sensor histidine kinase/response regulator | AX767_RS16660 | Not Available | Positive | 3454172 - 3455995 | 66297.0 |
| tripartite tricarboxylate transporter substrate binding protein | AX767_RS16665 | Not Available | Negative | 3455967 - 3456962 | 34086.7 |
| caib/baif coa transferase family protein | AX767_RS16670 | Not Available | Negative | 3456997 - 3458157 | 41606.8 |
| hydroxymethylglutaryl-coa lyase | AX767_RS16675 | Not Available | Negative | 3458166 - 3459113 | 33081.9 |
| lysr family transcriptional regulator | AX767_RS16680 | Not Available | Positive | 3459218 - 3460132 | 33083.2 |
| lrp/asnc family transcriptional regulator | AX767_RS16685 | Not Available | Negative | 3460129 - 3460611 | 17758.5 |
| 4-hydroxyphenylpyruvate dioxygenase | AX767_RS16690 | Not Available | Positive | 3460732 - 3461820 | 40494.5 |
| phenylalanine 4-monooxygenase | AX767_RS16695 | Not Available | Positive | 3461823 - 3462704 | 33151.3 |
| multidrug effflux mfs transporter | AX767_RS16700 | Not Available | Negative | 3462711 - 3463943 | 44587.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
