Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | AX767_RS16610 | Not Available | Negative | 3444846 - 3446171 | 46673.1 |
| lysr substrate-binding domain-containing protein | AX767_RS16615 | Not Available | Positive | 3446286 - 3447182 | 32070.4 |
| hypothetical protein | AX767_RS16620 | Not Available | Positive | 3447179 - 3447817 | 22700.7 |
| phosphonate transporter | AX767_RS16625 | Not Available | Positive | 3448036 - 3448428 | 14313.4 |
| diguanylate cyclase | AX767_RS16630 | Not Available | Positive | 3448441 - 3449799 | 49958.6 |
| ggdef domain-containing protein | AX767_RS22040 | Not Available | Positive | 3449792 - 3450559 | 27419.6 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | AX767_RS21715 | Not Available | Positive | 3450454 - 3451542 | 38938.8 |
| nitroreductase | AX767_RS16640 | Not Available | Positive | 3451945 - 3452622 | 25048.9 |
| hypothetical protein | AX767_RS16645 | Not Available | Negative | 3452640 - 3452972 | 11558.7 |
| hypothetical protein | AX767_RS16650 | Not Available | Negative | 3452987 - 3453238 | 8398.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
