Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rok family protein | AX767_RS16410 | Not Available | Positive | 3405734 - 3406816 | 39818.8 |
| phospholipase d-like domain-containing protein | AX767_RS16415 | Not Available | Negative | 3406826 - 3408211 | 51083.0 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | AX767_RS16420 | Not Available | Negative | 3408233 - 3409354 | 41668.8 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | AX767_RS16425 | Not Available | Positive | 3409502 - 3410614 | 41784.4 |
| gntr family transcriptional regulator | AX767_RS16430 | Not Available | Positive | 3410611 - 3411378 | 27728.3 |
| pdr/vanb family oxidoreductase | AX767_RS16435 | Not Available | Positive | 3411393 - 3412379 | 35967.1 |
| abc transporter substrate-binding protein | AX767_RS16440 | Not Available | Positive | 3412502 - 3413674 | 41785.6 |
| branched-chain amino acid abc transporter permease | AX767_RS16445 | Not Available | Positive | 3413679 - 3414551 | 30873.2 |
| branched-chain amino acid abc transporter permease | AX767_RS16450 | Not Available | Positive | 3414551 - 3415519 | 34403.2 |
| abc transporter atp-binding protein | AX767_RS16455 | Not Available | Positive | 3415516 - 3416274 | 27074.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
