Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease | AX767_RS16360 | Not Available | Negative | 3396151 - 3396639 | 18148.7 |
| trap transporter substrate-binding protein | AX767_RS16365 | Not Available | Negative | 3396653 - 3397618 | 35781.3 |
| glucurono-1,5-lactonase | AX767_RS16370 | Not Available | Negative | 3397651 - 3398550 | 32196.1 |
| nad-dependent epimerase/dehydratase family protein | AX767_RS16375 | Not Available | Negative | 3398555 - 3399364 | 29027.5 |
| fadr/gntr family transcriptional regulator | AX767_RS16380 | Not Available | Positive | 3399430 - 3400260 | 29872.7 |
| bug family tripartite tricarboxylate transporter substrate binding protein | AX767_RS16385 | Not Available | Positive | 3400350 - 3401324 | 34012.3 |
| 5-dehydro-4-deoxyglucarate dehydratase | AX767_RS16390 | Not Available | Positive | 3401334 - 3402245 | 32784.7 |
| nuclear transport factor 2 family protein | AX767_RS16395 | Not Available | Positive | 3402242 - 3402613 | 13304.1 |
| aldehyde dehydrogenase family protein | AX767_RS16400 | Not Available | Positive | 3402641 - 3404077 | 50570.5 |
| glycine betaine abc transporter substrate-binding protein | AX767_RS16405 | Not Available | Negative | 3404107 - 3405561 | 50996.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
