Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is21 family transposase | AX767_RS16115 | Not Available | Positive | 3333229 - 3334752 | 57130.1 |
| is21-like element helper atpase istb | AX767_RS16120 | Not Available | Positive | 3334745 - 3335536 | 29048.8 |
| serine hydrolase domain-containing protein | AX767_RS16125 | Not Available | Positive | 3335737 - 3336285 | 20114.5 |
| type vi secretion system baseplate subunit tssg | AX767_RS16130 | Not Available | Positive | 3336249 - 3337370 | 42446.0 |
| type vi secretion system atpase tssh | AX767_RS16135 | Not Available | Positive | 3337399 - 3340077 | 96314.2 |
| type vi secretion system vgr family protein | AX767_RS21955 | Not Available | Positive | 3340107 - 3341342 | 46215.0 |
| type vi secretion system vgr family protein | AX767_RS21960 | Not Available | Positive | 3341360 - 3342910 | 53820.9 |
| m23 family metallopeptidase | AX767_RS16150 | Not Available | Positive | 3342922 - 3343779 | 30689.2 |
| hypothetical protein | AX767_RS16155 | Not Available | Positive | 3343785 - 3345272 | 55136.6 |
| hypothetical protein | AX767_RS21425 | Not Available | Positive | 3345269 - 3345955 | 24878.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
