Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | AX767_RS15925 | Not Available | Negative | 3292757 - 3293965 | 42969.8 |
| efflux rnd transporter permease subunit | AX767_RS15930 | Not Available | Negative | 3293970 - 3297176 | 113929.0 |
| fluoride efflux transporter crcb | AX767_RS15935 | Not Available | Negative | 3297266 - 3297649 | 13137.6 |
| trap transporter large permease | AX767_RS15940 | Not Available | Negative | 3297669 - 3298970 | 45950.3 |
| trap transporter small permease | AX767_RS15945 | Not Available | Negative | 3298963 - 3299469 | 18689.2 |
| serine hydrolase domain-containing protein | AX767_RS15950 | Not Available | Negative | 3299488 - 3300455 | 35132.6 |
| comea family dna-binding protein | AX767_RS15955 | Not Available | Negative | 3300591 - 3300932 | 11746.4 |
| serine hydrolase domain-containing protein | AX767_RS15960 | Not Available | Negative | 3301065 - 3302241 | 43570.2 |
| lapa family protein | AX767_RS15965 | Not Available | Negative | 3302231 - 3302527 | 10817.4 |
| integration host factor subunit beta | AX767_RS15970 | Not Available | Negative | 3302565 - 3302879 | 11694.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
