Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic ring-hydroxylating oxygenase subunit alpha | AX767_RS15680 | Not Available | Negative | 3240758 - 3241903 | 43430.2 |
| exodeoxyribonuclease vii small subunit | AX767_RS15685 | Not Available | Positive | 3242086 - 3242334 | 8737.49 |
| polyprenyl synthetase family protein | AX767_RS15690 | Not Available | Positive | 3242370 - 3243248 | 30145.3 |
| 1-deoxy-d-xylulose-5-phosphate synthase | AX767_RS15695 | Not Available | Positive | 3243261 - 3245120 | 66018.5 |
| trap transporter substrate-binding protein | AX767_RS15700 | Not Available | Positive | 3245261 - 3246343 | 39368.2 |
| trap transporter large permease | AX767_RS15705 | Not Available | Negative | 3246431 - 3248269 | 65097.4 |
| trap transporter small permease subunit | AX767_RS15710 | Not Available | Negative | 3248291 - 3248920 | 23134.4 |
| sumf1/egtb/pvdo family nonheme iron enzyme | AX767_RS15715 | Not Available | Positive | 3249077 - 3250375 | 48171.6 |
| duf3053 family protein | AX767_RS15720 | Not Available | Positive | 3250395 - 3251096 | 25116.3 |
| mfs transporter | AX767_RS15725 | Not Available | Negative | 3251099 - 3252523 | 50373.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
