Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | AX767_RS15480 | Not Available | Positive | 3202056 - 3202646 | 20998.4 |
| duf47 domain-containing protein | AX767_RS15485 | Not Available | Positive | 3202752 - 3203396 | 24630.4 |
| inorganic phosphate transporter | AX767_RS15490 | Not Available | Positive | 3203410 - 3204420 | 35243.8 |
| response regulator | AX767_RS15495 | Not Available | Positive | 3204602 - 3205234 | 23323.2 |
| histidine kinase dimerization/phospho-acceptor domain-containing protein | AX767_RS15500 | Not Available | Positive | 3205231 - 3206460 | 44304.7 |
| nuclear transport factor 2 family protein | AX767_RS15505 | Not Available | Positive | 3206573 - 3206929 | 12955.7 |
| hypothetical protein | AX767_RS15510 | Not Available | Negative | 3206954 - 3207400 | 16332.0 |
| gnat family n-acetyltransferase | AX767_RS15515 | Not Available | Negative | 3207410 - 3207931 | 18661.2 |
| 30s ribosomal protein s16 | AX767_RS15520 | Not Available | Positive | 3208102 - 3208365 | 9660.72 |
| ribosome maturation factor rimm | AX767_RS15525 | Not Available | Positive | 3208385 - 3208936 | 19857.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
