Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trans-aconitate 2-methyltransferase | AX767_RS15290 | Not Available | Positive | 3153665 - 3154447 | 28765.4 |
| hpch/hpai aldolase/citrate lyase family protein | AX767_RS15295 | Not Available | Positive | 3154444 - 3155451 | 35301.2 |
| hypothetical protein | AX767_RS15300 | Not Available | Positive | 3155459 - 3156019 | 19880.2 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | AX767_RS15305 | Not Available | Positive | 3156090 - 3158675 | 92487.4 |
| pyridoxamine 5'-phosphate oxidase family protein | AX767_RS15310 | Not Available | Negative | 3158734 - 3159234 | 18332.6 |
| hypothetical protein | AX767_RS21405 | Not Available | Positive | 3159559 - 3159696 | 4795.74 |
| tandem-95 repeat protein | AX767_RS15315 | Not Available | Positive | 3159796 - 3165927 | 207115.0 |
| tolc family outer membrane protein | AX767_RS15325 | Not Available | Positive | 3168893 - 3170314 | 50161.0 |
| hypothetical protein | AX767_RS21930 | Not Available | Positive | 3170311 - 3170697 | 13995.7 |
| type i secretion system permease/atpase | AX767_RS15330 | Not Available | Positive | 3170694 - 3172670 | 71306.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
