Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | AX767_RS01180 | Not Available | Positive | 216951 - 218315 | 49851.1 |
| acyl-coa thioesterase | AX767_RS01185 | Not Available | Negative | 218320 - 218742 | 15820.0 |
| dmt family transporter | AX767_RS01190 | Not Available | Negative | 218739 - 219581 | 29376.3 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | AX767_RS01200 | Not Available | Positive | 219863 - 221560 | 61938.2 |
| trap transporter substrate-binding protein | AX767_RS01205 | Not Available | Positive | 221691 - 222659 | 34989.2 |
| trap transporter small permease | AX767_RS01210 | Not Available | Positive | 222656 - 223150 | 18408.2 |
| trap transporter large permease | AX767_RS01215 | Not Available | Positive | 223147 - 224424 | 44981.1 |
| o-methyltransferase | AX767_RS01220 | Not Available | Negative | 224468 - 225079 | 22211.4 |
| nmra family nad(p)-binding protein | AX767_RS01225 | Not Available | Negative | 225082 - 226002 | 32120.9 |
| hypothetical protein | AX767_RS01230 | Not Available | Negative | 226016 - 226408 | 15155.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
