Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide biosynthesis protein | AX767_RS14990 | Not Available | Negative | 3094515 - 3095819 | 47244.7 |
| gdp-l-fucose synthase | AX767_RS14995 | Not Available | Negative | 3095835 - 3096824 | 36300.5 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | AX767_RS15000 | Not Available | Negative | 3096821 - 3098260 | 51999.1 |
| sugar transferase | AX767_RS15005 | Not Available | Negative | 3098257 - 3098979 | 27357.1 |
| rne/rng family ribonuclease | AX767_RS15010 | Not Available | Negative | 3099375 - 3102434 | 111342.0 |
| rlua family pseudouridine synthase | AX767_RS15015 | Not Available | Positive | 3102962 - 3104026 | 38249.5 |
| had-ia family hydrolase | AX767_RS15020 | Not Available | Positive | 3104019 - 3104687 | 24447.0 |
| rieske (2fe-2s) protein | AX767_RS15025 | Not Available | Positive | 3104697 - 3105074 | 13795.2 |
| s49 family peptidase | AX767_RS15030 | Not Available | Positive | 3105085 - 3106128 | 37831.2 |
| mfs transporter | AX767_RS15035 | Not Available | Negative | 3106144 - 3107304 | 39485.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
