Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii synthase | AX767_RS14935 | Not Available | Positive | 3083428 - 3084201 | 27083.1 |
| uroporphyrinogen-iii c-methyltransferase | AX767_RS14940 | Not Available | Positive | 3084198 - 3085289 | 39428.3 |
| heme biosynthesis hemy n-terminal domain-containing protein | AX767_RS14945 | Not Available | Positive | 3085295 - 3086578 | 46573.3 |
| polysaccharide biosynthesis/export family protein | AX767_RS14950 | Not Available | Positive | 3086895 - 3087971 | 37711.5 |
| low molecular weight protein-tyrosine-phosphatase | AX767_RS14955 | Not Available | Positive | 3087989 - 3088426 | 16117.8 |
| polysaccharide biosynthesis tyrosine autokinase | AX767_RS14960 | Not Available | Positive | 3088405 - 3090693 | 83184.5 |
| glycosyltransferase wbub | AX767_RS14965 | Not Available | Negative | 3090784 - 3092031 | 45591.2 |
| hypothetical protein | AX767_RS14970 | Not Available | Negative | 3092028 - 3092444 | 15137.1 |
| o-antigen ligase family protein | AX767_RS14975 | Not Available | Negative | 3092450 - 3093316 | 31638.1 |
| glycosyltransferase | AX767_RS14980 | Not Available | Negative | 3093331 - 3094170 | 30785.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
