Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| opgc domain-containing protein | AX767_RS14850 | Not Available | Positive | 3057575 - 3058738 | 43008.2 |
| sgnh/gdsl hydrolase family protein | AX767_RS14855 | Not Available | Negative | 3058683 - 3059450 | 27973.6 |
| anti-sigma factor domain-containing protein | AX767_RS14860 | Not Available | Negative | 3059447 - 3060205 | 26444.2 |
| sigma-70 family rna polymerase sigma factor | AX767_RS14865 | Not Available | Negative | 3060219 - 3060794 | 21741.2 |
| duf3455 domain-containing protein | AX767_RS14870 | Not Available | Positive | 3060979 - 3061533 | 19122.3 |
| argininosuccinate lyase | AX767_RS14875 | Not Available | Negative | 3061538 - 3062935 | 51522.0 |
| sensor histidine kinase | AX767_RS14880 | Not Available | Positive | 3062958 - 3064067 | 39856.9 |
| lytr/algr family response regulator transcription factor | AX767_RS14885 | Not Available | Positive | 3064064 - 3064813 | 27676.3 |
| ai-2e family transporter | AX767_RS14890 | Not Available | Positive | 3064810 - 3065979 | 41703.8 |
| nad(p)/fad-dependent oxidoreductase | AX767_RS14895 | Not Available | Negative | 3066052 - 3066948 | 31500.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
