Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prsw family intramembrane metalloprotease | AX767_RS14650 | Not Available | Negative | 3010597 - 3011769 | 42650.6 |
| hypothetical protein | AX767_RS14655 | Not Available | Negative | 3011778 - 3012317 | 19741.6 |
| bug family tripartite tricarboxylate transporter substrate binding protein | AX767_RS14660 | Not Available | Negative | 3012330 - 3013304 | 33721.7 |
| cdp-6-deoxy-delta-3,4-glucoseen reductase | AX767_RS14665 | Not Available | Negative | 3013301 - 3014365 | 38785.3 |
| nad-dependent epimerase/dehydratase family protein | AX767_RS14670 | Not Available | Positive | 3014403 - 3015326 | 33626.8 |
| abc transporter atp-binding protein | AX767_RS14675 | Not Available | Negative | 3015349 - 3016071 | 25603.5 |
| abc transporter permease subunit | AX767_RS14680 | Not Available | Negative | 3016082 - 3018028 | 69786.4 |
| branched-chain amino acid abc transporter permease | AX767_RS14685 | Not Available | Negative | 3018040 - 3018915 | 30517.6 |
| abc transporter substrate-binding protein | AX767_RS14690 | Not Available | Negative | 3018995 - 3020134 | 40774.9 |
| cache domain-containing protein | AX767_RS14695 | Not Available | Positive | 3020374 - 3021729 | 49863.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
