Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan editing factor pgef | AX767_RS01130 | Not Available | Negative | 208136 - 208867 | 25242.8 |
| maleylacetoacetate isomerase | AX767_RS01135 | Not Available | Negative | 208867 - 209505 | 24096.8 |
| fumarylacetoacetate hydrolase family protein | AX767_RS01140 | Not Available | Positive | 209617 - 210318 | 24988.1 |
| nudix hydrolase | AX767_RS01145 | Not Available | Positive | 210345 - 210896 | 20848.9 |
| crea family protein | AX767_RS01150 | Not Available | Positive | 210902 - 211384 | 17305.2 |
| abc transporter atp-binding protein | AX767_RS01155 | Not Available | Positive | 211389 - 213128 | 62550.7 |
| murein hydrolase activator envc family protein | AX767_RS01160 | Not Available | Positive | 213179 - 213688 | 18004.8 |
| phosphoethanolamine transferase | AX767_RS01165 | Not Available | Negative | 213690 - 215330 | 60125.1 |
| phosphatase pap2 family protein | AX767_RS01170 | Not Available | Negative | 215491 - 216168 | 24569.1 |
| response regulator transcription factor | AX767_RS01175 | Not Available | Positive | 216283 - 216954 | 24697.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
