Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l28 | AX767_RS14600 | Not Available | Negative | 3000066 - 3000299 | 8793.68 |
| thioredoxin-disulfide reductase | AX767_RS14605 | Not Available | Negative | 3000419 - 3001381 | 34250.9 |
| crp/fnr family transcriptional regulator | AX767_RS14610 | Not Available | Positive | 3001554 - 3002228 | 25112.8 |
| dna translocase ftsk | AX767_RS14615 | Not Available | Positive | 3002359 - 3004749 | 87069.2 |
| outer membrane lipoprotein chaperone lola | AX767_RS14620 | Not Available | Positive | 3004766 - 3005398 | 22274.5 |
| replication-associated recombination protein a | AX767_RS14625 | Not Available | Positive | 3005424 - 3006716 | 47616.1 |
| branched-chain amino acid abc transporter permease | AX767_RS14630 | Not Available | Positive | 3006954 - 3007883 | 32378.0 |
| branched-chain amino acid abc transporter permease | AX767_RS14635 | Not Available | Positive | 3007895 - 3009085 | 41751.1 |
| abc transporter atp-binding protein | AX767_RS14640 | Not Available | Positive | 3009099 - 3009869 | 27994.0 |
| abc transporter atp-binding protein | AX767_RS14645 | Not Available | Positive | 3009871 - 3010587 | 25409.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
