Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AX767_RS14400 | Not Available | Positive | 2958198 - 2958887 | 24741.1 |
| tylf/mycf/novp-related o-methyltransferase | AX767_RS14405 | Not Available | Positive | 2958963 - 2959694 | 27119.8 |
| single-stranded-dna-specific exonuclease recj | AX767_RS14410 | Not Available | Negative | 2959691 - 2961412 | 61323.1 |
| hypothetical protein | AX767_RS14415 | Not Available | Negative | 2961409 - 2962380 | 34047.4 |
| lipoprotein-releasing abc transporter permease subunit | AX767_RS14420 | Not Available | Positive | 2962416 - 2963672 | 45176.6 |
| lipoprotein-releasing abc transporter atp-binding protein lold | AX767_RS14425 | Not Available | Positive | 2963665 - 2964384 | 25444.8 |
| alanine racemase | AX767_RS14430 | Not Available | Positive | 2964410 - 2965672 | 45029.3 |
| sdr family nad(p)-dependent oxidoreductase | AX767_RS14435 | Not Available | Negative | 2965677 - 2966435 | 25460.5 |
| vwa domain-containing protein | AX767_RS14440 | Not Available | Negative | 2966467 - 2967510 | 37386.0 |
| duf58 domain-containing protein | AX767_RS14445 | Not Available | Negative | 2967507 - 2968502 | 37037.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
