Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein uree | AX767_RS14350 | Not Available | Negative | 2948306 - 2948896 | 21070.0 |
| shoct domain-containing protein | AX767_RS14355 | Not Available | Negative | 2948906 - 2949766 | 30559.3 |
| abrb/maze/spovt family dna-binding domain-containing protein | AX767_RS14360 | Not Available | Positive | 2949856 - 2950080 | 8281.11 |
| type ii toxin-antitoxin system death-on-curing family toxin | AX767_RS14365 | Not Available | Positive | 2950077 - 2950466 | 13915.7 |
| urease subunit alpha | AX767_RS14370 | Not Available | Negative | 2950474 - 2952192 | 60866.9 |
| urease subunit beta | AX767_RS14375 | Not Available | Negative | 2952192 - 2952497 | 11069.2 |
| hupe/urej family protein | AX767_RS14380 | Not Available | Negative | 2952514 - 2953116 | 20086.2 |
| urease subunit gamma | AX767_RS14385 | Not Available | Negative | 2953143 - 2953445 | 10833.3 |
| atp-binding protein | AX767_RS14390 | Not Available | Positive | 2953533 - 2957162 | 131493.0 |
| response regulator transcription factor | AX767_RS14395 | Not Available | Positive | 2957159 - 2958157 | 36136.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
