Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | AX767_RS14300 | Not Available | Positive | 2938211 - 2938885 | 24669.7 |
| Trna-ser | Not Available | Not Available | Positive | 2938927 - 2939014 | Not Available |
| dna ligase d | AX767_RS14310 | Not Available | Positive | 2939376 - 2941892 | 91463.6 |
| hypothetical protein | AX767_RS14315 | Not Available | Positive | 2941983 - 2942486 | 17690.1 |
| hupe/urej family protein | AX767_RS14320 | Not Available | Negative | 2942507 - 2943697 | 42366.8 |
| tetratricopeptide repeat protein | AX767_RS14325 | Not Available | Negative | 2943694 - 2944926 | 44784.5 |
| hypothetical protein | AX767_RS14330 | Not Available | Negative | 2944940 - 2945248 | 9976.62 |
| duf4331 domain-containing protein | AX767_RS14335 | Not Available | Negative | 2945258 - 2946733 | 50843.1 |
| urease accessory protein ureg | AX767_RS14340 | Not Available | Negative | 2946961 - 2947611 | 23301.3 |
| urease accessory protein uref | AX767_RS14345 | Not Available | Negative | 2947617 - 2948306 | 25011.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
