Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor greb | AX767_RS14250 | Not Available | Positive | 2928840 - 2929418 | 21017.5 |
| rela/spot family protein | AX767_RS14255 | Not Available | Negative | 2929432 - 2931687 | 82980.7 |
| dna-directed rna polymerase subunit omega | AX767_RS14260 | Not Available | Negative | 2931784 - 2931987 | 7416.32 |
| guanylate kinase | AX767_RS14265 | Not Available | Negative | 2932016 - 2932636 | 23103.6 |
| yicc/yloc family endoribonuclease | AX767_RS14270 | Not Available | Negative | 2932648 - 2933562 | 33362.0 |
| serine/threonine protein kinase | AX767_RS14275 | Not Available | Positive | 2933654 - 2934661 | 37725.9 |
| pp2c family protein-serine/threonine phosphatase | AX767_RS14280 | Not Available | Positive | 2934658 - 2935563 | 32418.5 |
| ribonuclease ph | AX767_RS14285 | Not Available | Positive | 2935613 - 2936344 | 25626.6 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | AX767_RS14290 | Not Available | Positive | 2936347 - 2936946 | 21171.4 |
| radical sam family heme chaperone hemw | AX767_RS14295 | Not Available | Positive | 2936952 - 2938205 | 45796.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
