Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle-docking protein ftsy | AX767_RS14050 | Not Available | Negative | 2893069 - 2894343 | 44573.9 |
| m16 family metallopeptidase | AX767_RS14055 | Not Available | Positive | 2894373 - 2895830 | 52631.7 |
| m16 family metallopeptidase | AX767_RS14060 | Not Available | Positive | 2895845 - 2897200 | 47819.2 |
| rsmd family rna methyltransferase | AX767_RS14065 | Not Available | Positive | 2897197 - 2897850 | 23250.0 |
| pantetheine-phosphate adenylyltransferase | AX767_RS14070 | Not Available | Positive | 2897895 - 2898398 | 18457.2 |
| 5-oxoprolinase subunit pxpb | AX767_RS14075 | Not Available | Positive | 2898404 - 2899063 | 23563.3 |
| biotin-dependent carboxyltransferase family protein | AX767_RS14080 | Not Available | Positive | 2899060 - 2900106 | 36978.5 |
| 5-oxoprolinase subunit pxpa | AX767_RS14085 | Not Available | Positive | 2900096 - 2900830 | 25680.6 |
| pyroglutamyl-peptidase i | AX767_RS14090 | Not Available | Positive | 2900827 - 2901495 | 23223.1 |
| hypothetical protein | AX767_RS14095 | Not Available | Positive | 2901576 - 2901806 | 8392.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
