Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2970 domain-containing protein | AX767_RS14000 | Not Available | Positive | 2885717 - 2885923 | 7271.12 |
| cytochrome c oxidase subunit 3 | AX767_RS14005 | Not Available | Positive | 2885973 - 2886854 | 33033.1 |
| twin transmembrane helix small protein | AX767_RS14010 | Not Available | Negative | 2886935 - 2887165 | 8015.35 |
| surf1 family protein | AX767_RS14015 | Not Available | Positive | 2887193 - 2887990 | 29249.2 |
| hypothetical protein | AX767_RS14020 | Not Available | Positive | 2887983 - 2888657 | 24720.8 |
| cox15/ctaa family protein | AX767_RS14025 | Not Available | Positive | 2888662 - 2889855 | 42684.8 |
| heme o synthase | AX767_RS14030 | Not Available | Positive | 2889852 - 2890757 | 32965.1 |
| sco family protein | AX767_RS14035 | Not Available | Positive | 2890768 - 2891385 | 22070.5 |
| rna polymerase sigma factor rpoh | AX767_RS14040 | Not Available | Negative | 2891461 - 2892405 | 34685.5 |
| fha domain-containing protein | AX767_RS14045 | Not Available | Positive | 2892728 - 2893063 | 12298.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
