Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AX767_RS13855 | Not Available | Positive | 2856959 - 2857909 | 34820.9 |
| nadp-dependent isocitrate dehydrogenase | AX767_RS13860 | Not Available | Negative | 2857949 - 2860186 | 81651.3 |
| ribonuclease hi family protein | AX767_RS13865 | Not Available | Negative | 2860232 - 2860696 | 16096.4 |
| nucleoside 2-deoxyribosyltransferase | AX767_RS13870 | Not Available | Negative | 2860693 - 2861241 | 19151.8 |
| hypothetical protein | AX767_RS13875 | Not Available | Positive | 2861455 - 2861745 | 10220.4 |
| sdr family nad(p)-dependent oxidoreductase | AX767_RS13880 | Not Available | Positive | 2861813 - 2862577 | 26587.7 |
| marr family winged helix-turn-helix transcriptional regulator | AX767_RS13885 | Not Available | Negative | 2862594 - 2863064 | 17162.8 |
| acyl-coa dehydrogenase family protein | AX767_RS13890 | Not Available | Negative | 2863094 - 2864818 | 62401.9 |
| abc transporter atp-binding protein | AX767_RS13895 | Not Available | Negative | 2864826 - 2865554 | 26201.2 |
| abc transporter permease subunit | AX767_RS13900 | Not Available | Negative | 2865675 - 2867468 | 63805.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
