Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c-type cytochrome | AX767_RS13805 | Not Available | Positive | 2848725 - 2849414 | 23994.6 |
| protocatechuate 3,4-dioxygenase subunit alpha | AX767_RS13810 | Not Available | Negative | 2849488 - 2850093 | 21796.5 |
| protocatechuate 3,4-dioxygenase subunit beta | AX767_RS13815 | Not Available | Negative | 2850114 - 2850839 | 26998.1 |
| lysr substrate-binding domain-containing protein | AX767_RS13820 | Not Available | Positive | 2850930 - 2851922 | 35188.1 |
| duf1841 family protein | AX767_RS13825 | Not Available | Negative | 2851898 - 2852332 | 16465.4 |
| sugar phosphate isomerase/epimerase family protein | AX767_RS13830 | Not Available | Positive | 2852369 - 2853421 | 38982.0 |
| iclr family transcriptional regulator domain-containing protein | AX767_RS13835 | Not Available | Negative | 2853442 - 2854227 | 28120.3 |
| 3-oxoacid coa-transferase subunit a | AX767_RS13840 | Not Available | Positive | 2854352 - 2855053 | 24661.9 |
| 3-oxoacid coa-transferase subunit b | AX767_RS13845 | Not Available | Positive | 2855056 - 2855721 | 23342.3 |
| 3-oxoadipyl-coa thiolase | AX767_RS13850 | Not Available | Positive | 2855745 - 2856950 | 41861.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
