Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fecr family protein | AX767_RS13510 | Not Available | Negative | 2789229 - 2789711 | 16612.1 |
| cation diffusion facilitator family transporter | AX767_RS13515 | Not Available | Positive | 2789850 - 2790755 | 32299.5 |
| d-aminoacyl-trna deacylase | AX767_RS13520 | Not Available | Positive | 2790752 - 2791192 | 15214.5 |
| rrna maturation rnase ybey | AX767_RS13525 | Not Available | Negative | 2791227 - 2791679 | 16868.1 |
| phoh family protein | AX767_RS13530 | Not Available | Negative | 2791681 - 2792649 | 35432.1 |
| holliday junction branch migration protein ruva | AX767_RS13535 | Not Available | Positive | 2792682 - 2793263 | 20212.8 |
| duf1254 domain-containing protein | AX767_RS13540 | Not Available | Negative | 2793164 - 2794204 | 37319.4 |
| hypothetical protein | AX767_RS13545 | Not Available | Negative | 2794290 - 2794724 | 15156.9 |
| holliday junction branch migration dna helicase ruvb | AX767_RS13550 | Not Available | Positive | 2794813 - 2795868 | 38639.6 |
| cdf family co(ii)/ni(ii) efflux transporter dmef | AX767_RS13555 | Not Available | Positive | 2795870 - 2796811 | 33904.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
