Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone deacetylase family protein | AX767_RS13410 | Not Available | Positive | 2769648 - 2770694 | 37103.7 |
| tripartite tricarboxylate transporter substrate binding protein | AX767_RS13415 | Not Available | Positive | 2770787 - 2771758 | 34433.6 |
| mfs transporter | AX767_RS13420 | Not Available | Positive | 2771827 - 2772984 | 39523.6 |
| had family hydrolase | AX767_RS13425 | Not Available | Negative | 2772992 - 2773777 | 28268.4 |
| peptide chain release factor 3 | AX767_RS13430 | Not Available | Negative | 2773789 - 2775417 | 60394.6 |
| tigr01841 family phasin | AX767_RS13435 | Not Available | Negative | 2775505 - 2775978 | 17140.5 |
| hypothetical protein | AX767_RS13440 | Not Available | Negative | 2776079 - 2776726 | 22548.4 |
| adenosylhomocysteinase | AX767_RS13445 | Not Available | Positive | 2776929 - 2778368 | 51778.2 |
| tlya family rna methyltransferase | AX767_RS13450 | Not Available | Positive | 2778443 - 2779264 | 29397.0 |
| methylenetetrahydrofolate reductase | AX767_RS13455 | Not Available | Positive | 2779264 - 2780088 | 30001.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
