Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is66-like element accessory protein tnpa | AX767_RS13120 | Not Available | Positive | 2703890 - 2704297 | 14099.8 |
| is66 family insertion sequence element accessory protein tnpb | AX767_RS13125 | Not Available | Positive | 2704294 - 2704650 | 13176.2 |
| is66 family transposase | AX767_RS13130 | Not Available | Positive | 2704727 - 2706334 | 59998.4 |
| mbl fold metallo-hydrolase | AX767_RS13135 | Not Available | Negative | 2706419 - 2707018 | 21123.7 |
| amp-binding protein | AX767_RS13140 | Not Available | Negative | 2707072 - 2708763 | 61445.3 |
| esterase/lipase family protein | AX767_RS13145 | Not Available | Positive | 2708867 - 2709754 | 32616.2 |
| gnat family n-acetyltransferase | AX767_RS13150 | Not Available | Positive | 2709932 - 2710660 | 26689.0 |
| hlyc/corc family transporter | AX767_RS13155 | Not Available | Positive | 2710724 - 2711602 | 32335.3 |
| apolipoprotein n-acyltransferase | AX767_RS13160 | Not Available | Positive | 2711599 - 2713161 | 55925.8 |
| type ii asparaginase | AX767_RS13165 | Not Available | Positive | 2713279 - 2714346 | 37513.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
