Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | AX767_RS13070 | Not Available | Negative | 2691188 - 2692102 | 32250.4 |
| lyse family translocator | AX767_RS13075 | Not Available | Negative | 2692126 - 2692725 | 21337.7 |
| plp-dependent aminotransferase family protein | AX767_RS13080 | Not Available | Positive | 2692822 - 2694237 | 51698.3 |
| phospholipase d family protein | AX767_RS13085 | Not Available | Negative | 2694238 - 2695956 | 61125.8 |
| atp-binding cassette domain-containing protein | AX767_RS13090 | Not Available | Negative | 2696036 - 2697937 | 69883.2 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 2698483 - 2700017 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 2700087 - 2700163 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 2700188 - 2700263 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 2700622 - 2703497 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 2703641 - 2703753 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
