Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter permease | AX767_RS13020 | Not Available | Positive | 2682243 - 2683127 | 32919.6 |
| abc transporter atp-binding protein | AX767_RS13025 | Not Available | Positive | 2683174 - 2684292 | 40293.1 |
| gfo/idh/moca family protein | AX767_RS13030 | Not Available | Positive | 2684289 - 2685293 | 36354.7 |
| gntr family transcriptional regulator | AX767_RS13035 | Not Available | Positive | 2685290 - 2685991 | 25914.2 |
| threonine dehydratase | AX767_RS13040 | Not Available | Negative | 2686048 - 2687013 | 34202.8 |
| voc family protein | AX767_RS13045 | Not Available | Negative | 2687019 - 2687720 | 24576.5 |
| phzf family phenazine biosynthesis protein | AX767_RS13050 | Not Available | Negative | 2687731 - 2688642 | 32097.4 |
| glutathione s-transferase | AX767_RS13055 | Not Available | Negative | 2688651 - 2689292 | 23939.7 |
| lyse family translocator | AX767_RS13060 | Not Available | Negative | 2689328 - 2689963 | 21910.7 |
| plp-dependent aminotransferase family protein | AX767_RS13065 | Not Available | Negative | 2689983 - 2691191 | 43469.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
