Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glsb/yeaq/ymge family stress response membrane protein | AX767_RS12970 | Not Available | Positive | 2669089 - 2669337 | 8368.77 |
| abc transporter substrate-binding protein | AX767_RS12975 | Not Available | Positive | 2669523 - 2670680 | 39805.8 |
| hypothetical protein | AX767_RS12980 | Not Available | Positive | 2670715 - 2671068 | 13224.9 |
| histidine phosphatase family protein | AX767_RS12985 | Not Available | Negative | 2671094 - 2671768 | 24994.8 |
| autotransporter outer membrane beta-barrel domain-containing protein | AX767_RS12990 | Not Available | Positive | 2671938 - 2675954 | 128321.0 |
| dihydrodipicolinate synthase family protein | AX767_RS12995 | Not Available | Negative | 2676143 - 2677060 | 31820.2 |
| amidohydrolase family protein | AX767_RS13000 | Not Available | Negative | 2677097 - 2677966 | 31310.7 |
| ilvd/edd family dehydratase | AX767_RS13005 | Not Available | Negative | 2677963 - 2679684 | 60980.2 |
| abc transporter substrate-binding protein | AX767_RS13010 | Not Available | Positive | 2679915 - 2681243 | 48708.5 |
| carbohydrate abc transporter permease | AX767_RS13015 | Not Available | Positive | 2681272 - 2682237 | 36418.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
