Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine protein kinase | AX767_RS21690 | Not Available | Positive | 2646009 - 2647607 | 56701.6 |
| ompa family protein | AX767_RS12870 | Not Available | Positive | 2647604 - 2648812 | 42779.8 |
| replication restart helicase pria | AX767_RS12875 | Not Available | Negative | 2648823 - 2650919 | 75314.2 |
| uroporphyrinogen decarboxylase | AX767_RS12880 | Not Available | Negative | 2651285 - 2652406 | 40156.2 |
| mfs transporter | AX767_RS12885 | Not Available | Negative | 2652450 - 2653754 | 47043.4 |
| thioredoxin family protein | AX767_RS12890 | Not Available | Negative | 2653850 - 2654542 | 23888.6 |
| protein-disulfide reductase dsbd family protein | AX767_RS12895 | Not Available | Negative | 2654646 - 2656787 | 74301.0 |
| pqq-dependent sugar dehydrogenase | AX767_RS12900 | Not Available | Positive | 2657038 - 2658369 | 46681.8 |
| serine hydrolase domain-containing protein | AX767_RS21030 | Not Available | Negative | 2658395 - 2659130 | 25967.8 |
| set domain-containing protein | AX767_RS12915 | Not Available | Positive | 2659276 - 2659779 | 17679.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
