Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l10 | AX767_RS12765 | Not Available | Positive | 2618632 - 2619177 | 18752.8 |
| 50s ribosomal protein l7/l12 | AX767_RS12770 | Not Available | Positive | 2619224 - 2619595 | 12690.4 |
| dna-directed rna polymerase subunit beta | AX767_RS12775 | Not Available | Positive | 2619844 - 2623968 | 152837.0 |
| dna-directed rna polymerase subunit beta' | AX767_RS12780 | Not Available | Positive | 2623989 - 2628221 | 154990.0 |
| lema family protein | AX767_RS12785 | Not Available | Positive | 2628301 - 2628912 | 21661.0 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | AX767_RS12790 | Not Available | Positive | 2628992 - 2630317 | 48438.1 |
| duf4390 domain-containing protein | AX767_RS12795 | Not Available | Positive | 2630442 - 2630948 | 19073.0 |
| sensor histidine kinase | AX767_RS12800 | Not Available | Positive | 2630945 - 2633230 | 81750.7 |
| response regulator | AX767_RS12805 | Not Available | Positive | 2633278 - 2633979 | 25406.5 |
| Trna-phe | Not Available | Not Available | Positive | 2633998 - 2634073 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
