Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system baseplate subunit tssf | AX767_RS12565 | Not Available | Positive | 2582526 - 2584418 | 69564.7 |
| type vi secretion system baseplate subunit tssg | AX767_RS12570 | Not Available | Positive | 2584394 - 2585440 | 39033.6 |
| type vi secretion system atpase tssh | AX767_RS12575 | Not Available | Positive | 2585485 - 2588232 | 99577.3 |
| type vi secretion system vgr family protein | AX767_RS12580 | Not Available | Positive | 2588235 - 2590478 | 81954.8 |
| hypothetical protein | AX767_RS12585 | Not Available | Positive | 2590471 - 2590884 | 13957.5 |
| hypothetical protein | AX767_RS12590 | Not Available | Positive | 2590897 - 2591241 | 12460.9 |
| duf2169 domain-containing protein | AX767_RS12595 | Not Available | Positive | 2591238 - 2592278 | 37549.8 |
| duf2169 domain-containing protein | AX767_RS12600 | Not Available | Positive | 2592275 - 2593555 | 46539.8 |
| hypothetical protein | AX767_RS12605 | Not Available | Positive | 2593552 - 2594433 | 29185.6 |
| hypothetical protein | AX767_RS12610 | Not Available | Positive | 2594460 - 2594930 | 15647.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
