Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AX767_RS21600 | Not Available | Positive | 2550545 - 2550739 | 6517.32 |
| chat domain-containing protein | AX767_RS12470 | Not Available | Positive | 2550934 - 2553060 | 77195.0 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | AX767_RS12475 | Not Available | Positive | 2553063 - 2554742 | 59634.4 |
| filamentous hemagglutinin n-terminal domain-containing protein | AX767_RS12480 | Not Available | Positive | 2554778 - 2560360 | 182983.0 |
| diguanylate cyclase domain-containing protein | AX767_RS12485 | Not Available | Negative | 2560392 - 2561861 | 54017.8 |
| hypothetical protein | AX767_RS12490 | Not Available | Negative | 2562142 - 2563293 | 40938.4 |
| hypothetical protein | AX767_RS12495 | Not Available | Negative | 2563290 - 2564081 | 29241.8 |
| hybrid sensor histidine kinase/response regulator | AX767_RS12500 | Not Available | Negative | 2564096 - 2566072 | 69572.4 |
| abc transporter substrate-binding protein | AX767_RS12505 | Not Available | Negative | 2566069 - 2566959 | 30884.3 |
| hybrid sensor histidine kinase/response regulator | AX767_RS12510 | Not Available | Negative | 2567162 - 2569051 | 67486.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
