Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AX767_RS12420 | Not Available | Negative | 2537689 - 2537955 | 9602.8 |
| succinylglutamate desuccinylase/aspartoacylase family protein | AX767_RS12425 | Not Available | Positive | 2538043 - 2538999 | 34242.7 |
| ku protein | AX767_RS12430 | Not Available | Positive | 2539070 - 2540014 | 34702.7 |
| transglutaminase-like domain-containing protein | AX767_RS12435 | Not Available | Negative | 2540032 - 2540850 | 30620.6 |
| hypothetical protein | AX767_RS21910 | Not Available | Positive | 2541151 - 2541303 | 5220.31 |
| catalase hpii | AX767_RS12440 | Not Available | Positive | 2541300 - 2543480 | 79451.2 |
| type vi secretion system vgr family protein | AX767_RS12445 | Not Available | Positive | 2543683 - 2546835 | 112721.0 |
| hypothetical protein | AX767_RS12450 | Not Available | Positive | 2546832 - 2548886 | 76464.3 |
| hypothetical protein | AX767_RS12455 | Not Available | Positive | 2548886 - 2550124 | 44758.2 |
| hypothetical protein | AX767_RS12460 | Not Available | Positive | 2550124 - 2550477 | 12810.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
